BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021F06SP1|AL427789
(930 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1313 896 0.0
>3x_Contig1313
Length = 8010
Score = 896 bits (440), Expect = 0.0
Identities = 765/880 (86%), Gaps = 2/880 (0%)
Strand = Plus / Minus
Query: 32 atttgggtagat-aaagggtgaagttaaggttaaatatttattgggtcaagttggkgatg 90
||||||||||| ||| ||||||||||| | ||||| | ||||| || ||||| ||||
Sbjct: 6478 atttgggtagaccaaacggtgaagttaacgacaaatactcattggctccagttgccgatg 6419
Query: 91 aattgtttagattattggkaaagakagttaatttkttgcatgaktgtgttggtgaagadg 150
|||||| |||| ||||| |||| ||||| ||| |||||||| |||||||||||||| |
Sbjct: 6418 aattgtctagactattgcaaaagccagttactttcttgcatgactgtgttggtgaagaag 6359
Query: 151 tkacgaatggggttdagaagggtaaggkgggtgargttttkttattggdaadkttgagat 210
| || |||| ||| | || | ||||| ||||| ||||| |||||| || |||||||
Sbjct: 6358 tcaccaatgccgttaacaacgctaaggacggtgaagttttcctattggaaaacttgagat 6299
Query: 211 tttacatggaagaagaaggttaaagadaggtggatggtaagrdggttaaggttgakkagg 270
| |||| ||||||||||||| ||| ||||||||||||| |||||||| ||| |||
Sbjct: 6298 tccacatcgaagaagaaggttccagaaaggtggatggtaacaaggttaaggctgacaagg 6239
Query: 271 gtggtgttactaaattkagagaataattgagttttttgggkgatgtttakgttaacgatg 330
|| |||||| ||||| |||||| ||||||||| ||||| |||||||| ||||||||||
Sbjct: 6238 ctgctgttaccaaattcagagaacaattgagttctttggccgatgtttacgttaacgatg 6179
Query: 331 ctttgggtacggtttaaagaggttattttttkattgtkggtttggatttgakaaagagag 390
| || ||||| | | | |||| | | | || ||||| ||||| || ||| ||| ||||
Sbjct: 6178 ccttcggtaccgctcacagagctcactcttccattgtcggtttcgacttgccaaacagag 6119
Query: 391 ttgctggtttgttgttgtkgaagggattggkataktttgttaaggttttggraaagccaa 450
||| ||||| ||||||| |||| |||| ||| |||| ||||| ||||| ||| ||||
Sbjct: 6118 ctgccggtttcttgttgtccaaggaattgcaatactttgctaaggctttggaaaacccaa 6059
Query: 451 ctagacaatttttggttatkttgggtggtgataaggttgaagagaagatttaattgattg 510
| |||| ||| |||| ||| |||||||||| |||||||| ||| |||||| ||||||| |
Sbjct: 6058 ccagaccattcttggctatcttgggtggtgctaaggttgcagacaagattcaattgatcg 5999
Query: 511 agaatttgttggacaaggtagattctttgatgattggtggtggtatggttttgaatttga 570
| ||||||||||||||||| ||||||||||| |||||||||||||||| ||| | || |
Sbjct: 5998 acaatttgttggacaaggtcgattctttgatcattggtggtggtatggctttcaccttca 5939
Query: 571 agaaggtattggaaaacactgaaatcggtgactccatctacgatgctgctggtgccgaat 630
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5938 agaaggtcttggaaaacactgaaatcggtgactccatctacgatgctgctggtgccgaat 5879
Query: 631 tggttccaaagttggtcgaaaaggctaagaagaacaacgtcaagatcgtcttgccaactg 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5878 tggttccaaagttggtcgaaaaggctaagaagaacaacgtcaagatcgtcttgccaactg 5819
Query: 691 acttcgtcattggtgacaagttctctgctgatgctaacacaaaggttgtcacmgacaagg 750
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5818 acttcgtcattggtgacaagttctctgctgatgctaacacaaaggttgtcaccgacaagg 5759
Query: 751 aaggtattccaagcggctggcaagggttggacaacggtccagaatctagaaaggctttcg 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5758 aaggtattccaagcggctggcaagggttggacaacggtccagaatctagaaaggctttcg 5699
Query: 811 ctgccactgttgctgaagmtaagamtatcgtctggaacggtmcaccaggtgtyttcgaat 870
|||||||||||||||||| ||||| |||||||||||||||| |||||||||| |||||||
Sbjct: 5698 ctgccactgttgctgaagctaagactatcgtctggaacggtccaccaggtgtcttcgaat 5639
Query: 871 ttgctcctttcgctaagggta-cgaagctctattggacgc 909
||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5638 ttgctcctttcgctaagggtaccgaagctctattggacgc 5599
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.34
Gapped
Lambda K H
1.41 0.716 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5628
Number of Sequences: 1807
Number of extensions: 5628
Number of successful extensions: 135
Number of sequences better than 1.0e-20: 1
length of query: 930
length of database: 10,358,551
effective HSP length: 16
effective length of query: 914
effective length of database: 10,329,639
effective search space: 9441290046
effective search space used: 9441290046
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.5 bits)
S1: 12 (24.9 bits)
S2: 49 (100.2 bits)